Publications

2025

Super-Resolution Imaging Reveals Stretch-Induced Architectural Rearrangement of Desmoplakin in Desmosomes

Leslie D. Seeley, Collin M. Ainslie, Mary Kathryn Sewell-Loftin, and Alexa L. Mattheyses
BioRxiv
Manuscript Link

The role of actin dynamics in vesicle formation during clathrin mediated endocytosis

Jie Yuan, Yen T. B. Tran, Tomasz J. Nawara, and Alexa L. Mattheyses
BioRxiv
Manuscript Link

Desmoplakin tail domain position in the desmosomal plaque is isoform dependent

Collin M Ainslie, Krishna Patel*, Yen T. B. Tran, Navaneetha Krishnan Bharathan, Volker Spindler, and Alexa L Mattheyses
Journal of Cell Science
Manuscript Link
Research Highlight Link
First Person: Collin Ainslie and Krishna Patel Link
Cover Image Link

2024

Illuminating cellular architecture and dynamics with fluorescence polarization microscopy

Dean WF, Mattheyses AL
Journal of Cell Science
Manuscript Link

The Desmosome Comes into Focus

Bharathan NK, Mattheyses AL, and Kowalczyk AP
Journal of Cell Biology
Manuscript Link

OOPS: Object-Oriented Polarization Software for analysis of fluorescence polarization microscopy images

Dean WF, Nawara TJ, Alberts RM, and Mattheyses AL
PLoS Computational Biology
Manuscript Link

Dsg2 ectodomain organization increases throughout desmosome assembly

Dean WF*, Albert RM*, Nawara TJ, Ubil M, Beggs RR, and Mattheyses AL
Cell Adhesion & Migration
Manuscript Link

Fluidic shear stress alters clathrin dynamics and vesicle formation in endothelial cells

Nawara TJ, Yuan J, Seeley LD, Stzul E, and Mattheyses AL
Biophysical Journal
Manuscript Link

2023

Sialylation of EGFR by ST6GAL1 induces receptor activation and modulates trafficking dynamics

Ankenbauer KE, Rao TC, Mattheyses AL, and Bellis SL
Journal of Biological Chemistry

Manuscript Link

DrSTAR: Tracking real-time nanometer axial changes

Nawara TN, Dean WF, and Mattheyses AL
Biophysical Journal

Manuscript Link
Cover Link

Imaging nanoscale axial dynamics at the basal plasma membrane

Nawara TN and Mattheyses AL
The International Journal of Biochemistry and Cell Biology

Manuscript Link

2022

Defining domain-specific orientational order in the desmosomal cadherins

Dean WF and Mattheyses AL
Biophysical Journal

Manuscript Link
Cover Link
New and Notable Link

ST6Gal-I-mediated sialylation of the epidermal growth factor receptor modulates cell mechanics and enhances invasion

Rao TC, Beggs RR, Ankenbauer KE, Hwang J, Ma VP, Salaita K, Bellis SL, and Mattheyses AL
Journal of Biological Chemistry

Manuscript Link
UAB News Link

Imaging vesicle formation dynamics supports the flexible model of clathrin-mediated endocytosis

Tomasz J Nawara TJ, Williams 2nd YD, Rao TC, Hu Y, Sztul E, Salaita K, and Mattheyses AL
Nature Communications

Manuscript Link
UAB News Link



Tension Gauge Tether Probes for Quantifying Growth Factor Mediated Integrin Mechanics and Adhesion

Rao TC and Mattheyses AL
Journal of Visual Experiments

Manuscript Link

Live-Cell Total Internal Reflection Fluorescence (TIRF) Microscopy to Investigate Protein Internalization Dynamics

Rao TC, Nawara TJ, and Mattheyses AL
Methods in Molecular Biology

Manuscript Link

Desmosomes undergo dynamic architectural changes during assembly and maturation

Beggs RB. Rao TC, Dean WF, Kowalczyk AP, and Mattheyses AL
Tissue Barriers

Manuscript Link


2021

Turn-key super-resolution mapping of cell receptor force orientation and magnitude using a commercial structured illumination microscope

Blanchard AT, Combs JD, Brockman JM, Kellner A, Glazier R, Su H, Bender R, Bazrafshan A, Chen W, Quach ME, Li R, Mattheyses AL, and Salaita K
Nature Communications
Manuscript Link

dSTORM Imaging and Analysis of Desmosome Architecture

Beggs RR, Dean WF, and Mattheyses AL
Methods in Molecular Biology
Chapter Link


2020

Live-cell super-resolved PAINT imaging of piconewton cellular traction forces

Brockman JM, Su H, Blanchard AT, Duan Y, Meyer T, Quach ME, Glazier R, Bazrafshan A, Bender RL, Kellner AV, Ogasawara H, Ma R, Schueder F, Petrich BG, Jungmann R, Li R, Mattheyses AL, Ke Y, and Salaita K
Nature Methods

EGFR activation attenuates the mechanical threshold for integrin tension and focal adhesion formation

Rao TC, Ma VP-Y, Blanchard A, Urner TM, Grandhi S, Salaita K, and Mattheyses AL
Journal of Cell Science

Protein exchange regulates calcium independence of epithelial junctions

Bartle EI, Rao TC, Beggs RR, Dean WF, Urner TM, Kowalczyk AP, and Mattheyses AL
Journal of Cell Biology

Variable Incidence Angle Linear Dichroism (VALiD): a technique for unique 3D orientation measurement of fluorescent ensembles

Blanchard AT, Brockman JM, Salaita K, and Mattheyses AL
Optics Express


2019

DNA mechanotechnology reveals that integrin receptors apply pN forces in podosomes on fluid substrates

Glazier R, Brockman JM, Bartle E, Mattheyses AL, Destaing O, and Salaita K
Nature Communications

Pharmacologic inhibition of LIMK1 provides dendritic spine resilience against β-amyloid

Henderson BW, Greathouse KM, Ramdas R, Walker CK, Rao TC, Bach SV, Curtis KA, Day JJ, Mattheyses AL, and Herskowitz JH
Science Signaling

The desmosome is a mesoscale lipid raft-like membrane domain

Lewis JD, Caldara AL, Zimmer SE, Stahley SN, Seybold A, Strong NL, Frangakis AS, Levental I, Wahl JK 3rd, Mattheyses AL, Sasaki T, Nakabayashi K, Hata K, Matsubara Y, Ishida-Yamamoto A, Amagai M, Kubo A, and Kowalczyk AP
Molecular Biology of the Cell


2018

Bridging the gap: Super-resolution microscopy of epithelial cell junctions

Bartle EI, Rao T, Urner TM, and Mattheyses AL
Tissue Barriers

Cutting Edge: Intracellular IFN-β and Distinct Type I IFN Expression Patterns in Circulating Systemic Lupus Erythematosus B Cells

Hamilton JA, Wu Q, Yang P, Luo B, Liu S, Li J, Hong H, Fish EN, Mattheyses AL, Sanz I, Chatham WW, Hsu H, and Mountz JD
Journal of Immunology

Mapping the 3D Orientation of Piconewton Integrin Traction Forces

Brockman JM, Blanchard AT, Ma VP-Y, Derricotte WD, Zhang Y, Fay ME, Lam WA, Evangelista FA, Mattheyses AL*, Salaita K*
Nature Methods


2017

Desmoglein 3 Order and Dynamics in Desmosomes Determined by Fluorescence Polarization Microscopy

Bartle EI, Urner TM, Raju SS, and Mattheyses AL
Biophysical Journal

High-resolution imaging of muscle attachment structures in Caenorhabditis elegans

Qadota H, Matsunaga Y, Nguyen KCQ, Mattheyses A, Hall DH, and Benian GM
Cytoskeleton


2016

Molecular Organization of the Desmosome as Revealed by Direct Stochastic Optical Reconstruction Microscopy

Stahely SN, Bartle EI, Atkinson CA, Kowalczyk AP, and Mattheyses AL
Journal of Cell Science
”In this issue” featured article
F1000 PRIME Feature

Regulation of claudin/zonula occludens-1 complexes by hetero-claudin interactions

Schlingmann B, Overgaard CE, Molina SA, Lynn KS, Mitchell LA, Dorsainvil White S, Mattheyses AL, Guidot DM, Capaldo CT, and Koval M
Nature Communications

The Sodium Chloride Cotransporter (NCC) and Epithelial Sodium Channel (ENaC) Associate

Mistry AC, Wynne BM, Yu L, Tomilin V, Yue Q, Zhou Y, Al-Khalili O, Mallick R, Cai H, Alli AA, Ko B, Mattheyses A, Bao HF, Pochynyuk O, Theilig F, Eaton DC, Hoover RS
Biochemical Journal

ROCK1 and ROCK2 Inhibition Alters Dendritic Spine Morphology in Hippocampal Neurons

Swanger SA, Mattheyses AL, Gentry EG, and Herskowitz JH
Cellular Logistics

Nanoscale Optomechanical Actuators for Controlling Mechanotransduction in Living Cells

Liu Z, Liu Y, Chang Y, Seyf HR, Henry A, Mattheyses AL, Yehl K, Zhang Y, Huang Z, and Salaita KS
Nature Methods

Super-Resolution Microscopy Reveals Altered Desmosomal Protein Organization in Pemphigus Vulgaris Patient Tissue

Stahley SN, Warren MF, Feldman RJ, Swerlick RA, Mattheyses AL, and Kowalczyk AP
Journal of Investigative Dermatology


2015

Real-time Fluorescence Imaging with 20 nm Axial Resolution

Stabley D, Oh T, Simon SM, Mattheyses AL*, and Salaita KS*
Nature Communications

Foster resonance energy transfer (FRET) microscopy for monitoring biomolecular interactions

Mattheyses AL* and Marcus AI
Protein-Protein Interactions: Methods and Applications Second Edition


2014

The ARL2 GTPase is Required for Mitochondrial Morphology, Motility, and Maintenance of ATP Levels

Newman LE, Zhou C, Mudigonda S, Mattheyses AL, Paradies E, Marobbio CMT, and Kahn RA
Plos One

Manuscript Link

Polarization-Controlled TIRFM With Focal Drift and Spatial Field Intensity Correction

Johnson DS, Toledo-Crow R, Mattheyses AL, and Simon SM
Biophysical Journal

Manuscript Link

Desmosome assembly and disassembly are membrane raft-dependent

Stahley SN, Saito M, Faundez V, Koval M, Mattheyses AL, and Kowalczyk AP
Plos One

Manuscript Link


2013

Pharmacologic inhibition of ROCK2 suppresses amyloid-beta production in an Alzheimer disease mouse model

Herskowitz JH, Feng Y, Mattheyses AL, Hales C, Higginbotham L, Duong D, Montine T, Troncoso JC, Thambisetty M, Seyfried N, Levey AI, and Lah JJ
Journal of Neuroscience

Manuscript Link

The Chlamydomonas mutant pf27 is defective in radial spoke transport in the cilium

Alford LM, Mattheyses AL, Hunter EL, Lin H, Dutcher SK, and Sale WS
Cytoskeleton

Manuscript Link

Chemical-genetic disruption of clathrin function spares adaptor complex 3-dependent endosome vesicle biogenesis

Zlatic SA, Grossniklaus EJ, Ryder PV, Salazar G, Mattheyses AL, Peden AA, and Faundez V
Molecular Biology of the Cell

Manuscript Link

Conserved Spatial Organization of FG Domains in the Nuclear Pore Complex

Atkinson CE, Mattheyses AL, Kampmann M, and Simon SM
Biophysical Journal
Manuscript Link
Biophysical Journal New and Notable Link


2012

Signaling Network Crosstalk in Human Pluripotent Cells: a Smad2/3-Regulated Switch that Controls the Balance Between Self-Renewal and Differentiation

Singh AM, Reynolds D, Cliff T, Ohtsuka S, Mattheyses AL, Sun Y, Menendez L, Kulik M, and Dalton S
Cell Stem Cell

Manuscript Link
Comment in Cell Stem Cell Link

Domain Topology of Nucleoporin Nup98 Within the Nuclear Pore Complex

Chatel G, Desai SH, Mattheyses AL, Powers MA, and Fahrenkrog B
Journal of Structural Biology

Manuscript Link